Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3794 | Not Available | Positive | 4489444 - 4490214 | 28485.7 |
| regulator of nucleoside diphosphate kinase | SAMN04488524_3795 | Not Available | Negative | 4490225 - 4490602 | 14077.0 |
| hypothetical protein | SAMN04488524_3796 | Not Available | Negative | 4490761 - 4490907 | 5629.81 |
| res domain-containing protein | SAMN04488524_3797 | Not Available | Negative | 4490959 - 4491408 | 17180.9 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN04488524_3798 | Not Available | Negative | 4491410 - 4491874 | 16973.4 |
| response regulator receiver domain-containing protein | SAMN04488524_3799 | Not Available | Negative | 4491943 - 4492305 | 13624.4 |
| hypothetical protein | SAMN04488524_3800 | Not Available | Positive | 4492525 - 4492704 | 6545.84 |
| l-glyceraldehyde 3-phosphate reductase | SAMN04488524_3801 | Not Available | Positive | 4492763 - 4493749 | 36874.3 |
| hypothetical protein | SAMN04488524_3802 | Not Available | Positive | 4493769 - 4494419 | 24414.7 |
| Trna-lys | Not Available | Not Available | Positive | 4494500 - 4494572 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

