Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoin utilization deacetylase acuc | SAMN04488524_3763 | Not Available | Positive | 4457077 - 4457976 | 33375.4 |
| dna topoisomerase-3 | SAMN04488524_3764 | Not Available | Positive | 4457979 - 4459829 | 69083.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488524_3765 | Not Available | Positive | 4459838 - 4460917 | 40679.1 |
| hypothetical protein | SAMN04488524_3766 | Not Available | Positive | 4460902 - 4461378 | 18142.1 |
| hypothetical protein | SAMN04488524_3767 | Not Available | Positive | 4461369 - 4462214 | 31937.1 |
| trna dimethylallyltransferase | SAMN04488524_3768 | Not Available | Positive | 4462218 - 4463171 | 36108.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488524_3769 | Not Available | Positive | 4463363 - 4463893 | 18610.2 |
| hypothetical protein | SAMN04488524_3770 | Not Available | Positive | 4463966 - 4464538 | 20189.3 |
| protein of unknown function | SAMN04488524_3771 | Not Available | Positive | 4464638 - 4465171 | 19137.0 |
| citrate synthase | SAMN04488524_3772 | Not Available | Positive | 4465289 - 4466575 | 48427.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

