Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation domain-containing protein | SAMN04488524_3753 | Not Available | Negative | 4440281 - 4446862 | 241836.0 |
| two component transcriptional regulator, lyttr family | SAMN04488524_3754 | Not Available | Negative | 4447075 - 4447794 | 27557.2 |
| hypothetical protein | SAMN04488524_3755 | Not Available | Positive | 4448105 - 4449253 | 39377.8 |
| hypothetical protein | SAMN04488524_3756 | Not Available | Positive | 4449250 - 4451352 | 77701.0 |
| hypothetical protein | SAMN04488524_3757 | Not Available | Negative | 4451361 - 4451912 | 19861.4 |
| hypothetical protein | SAMN04488524_3758 | Not Available | Negative | 4452238 - 4452489 | 9770.69 |
| peptidase s46 | SAMN04488524_3759 | Not Available | Negative | 4452558 - 4454726 | 80727.4 |
| gaf domain-containing protein | SAMN04488524_3760 | Not Available | Positive | 4454863 - 4455339 | 17339.9 |
| dna-3-methyladenine glycosylase | SAMN04488524_3761 | Not Available | Positive | 4455332 - 4455937 | 22220.0 |
| putative membrane protein | SAMN04488524_3762 | Not Available | Positive | 4456215 - 4457075 | 32880.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

