Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3743 | Not Available | Negative | 4422277 - 4423314 | 39895.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_3744 | Not Available | Negative | 4423322 - 4424485 | 43635.2 |
| atp-binding cassette, subfamily b | SAMN04488524_3745 | Not Available | Negative | 4424492 - 4426306 | 67562.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488524_3746 | Not Available | Negative | 4426361 - 4427437 | 41660.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488524_3747 | Not Available | Negative | 4427472 - 4428566 | 40999.4 |
| wxcm-like, c-terminal | SAMN04488524_3748 | Not Available | Negative | 4428523 - 4428915 | 15069.0 |
| hypothetical protein | SAMN04488524_3749 | Not Available | Positive | 4428994 - 4429908 | 34684.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488524_3750 | Not Available | Positive | 4429914 - 4431080 | 44137.1 |
| 4'-phosphopantetheinyl transferase | SAMN04488524_3751 | Not Available | Negative | 4431085 - 4431783 | 26448.6 |
| amino acid adenylation domain-containing protein | SAMN04488524_3752 | Not Available | Negative | 4431770 - 4440265 | 316064.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

