Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(beta-d-mannuronate) lyase | SAMN04488524_0339 | Not Available | Positive | 473328 - 475556 | 81852.1 |
| hexosaminidase | SAMN04488524_0340 | Not Available | Negative | 475588 - 477798 | 83570.0 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488524_0341 | Not Available | Negative | 477923 - 480055 | 80889.6 |
| na+/h+-dicarboxylate symporter | SAMN04488524_0342 | Not Available | Positive | 480250 - 481515 | 44917.8 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04488524_0343 | Not Available | Negative | 481433 - 481999 | 21779.1 |
| peroxiredoxin | SAMN04488524_0344 | Not Available | Negative | 482115 - 482738 | 22651.7 |
| transcriptional regulator, arac family | SAMN04488524_0345 | Not Available | Negative | 482741 - 483592 | 32434.5 |
| hypothetical protein | SAMN04488524_0346 | Not Available | Negative | 483761 - 485056 | 45563.8 |
| lactoylglutathione lyase | SAMN04488524_0347 | Not Available | Negative | 485279 - 485752 | 17717.4 |
| hypothetical protein | SAMN04488524_0348 | Not Available | Negative | 485825 - 486121 | 10537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

