Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferases group 1 | SAMN04488524_3723 | Not Available | Positive | 4400377 - 4401579 | 45760.8 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488524_3724 | Not Available | Positive | 4401598 - 4402794 | 45512.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_3725 | Not Available | Positive | 4402791 - 4403936 | 42204.8 |
| glycosyl transferase family 2 | SAMN04488524_3726 | Not Available | Negative | 4403940 - 4404767 | 30967.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488524_3727 | Not Available | Negative | 4404777 - 4405859 | 42533.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488524_3728 | Not Available | Positive | 4405971 - 4407335 | 51015.0 |
| lipopolysaccharide biosynthesis protein, lps:glycosyltransferase | SAMN04488524_3729 | Not Available | Positive | 4407387 - 4408268 | 34032.8 |
| hypothetical protein | SAMN04488524_3730 | Not Available | Negative | 4408342 - 4409646 | 47017.1 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04488524_3731 | Not Available | Positive | 4410179 - 4410754 | 21202.7 |
| choline dehydrogenase | SAMN04488524_3732 | Not Available | Positive | 4410758 - 4412455 | 63416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

