Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymgg-like gly-zipper | SAMN04488524_3713 | Not Available | Positive | 4387935 - 4388408 | 16636.3 |
| pas domain s-box-containing protein | SAMN04488524_3714 | Not Available | Negative | 4388450 - 4391989 | 133385.0 |
| hypothetical protein | SAMN04488524_3715 | Not Available | Positive | 4392488 - 4392859 | 13715.4 |
| response regulator receiver domain-containing protein | SAMN04488524_3716 | Not Available | Positive | 4393158 - 4393541 | 14323.5 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488524_3717 | Not Available | Positive | 4393538 - 4394623 | 41776.9 |
| outer membrane efflux protein | SAMN04488524_3718 | Not Available | Positive | 4394680 - 4395360 | 25978.5 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN04488524_3719 | Not Available | Positive | 4395383 - 4397548 | 80639.1 |
| o-antigen ligase like membrane protein | SAMN04488524_3720 | Not Available | Positive | 4397557 - 4398837 | 47654.6 |
| acetyltransferase (isoleucine patch superfamily) | SAMN04488524_3721 | Not Available | Positive | 4398955 - 4399569 | 22229.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_3722 | Not Available | Positive | 4399588 - 4400367 | 30828.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

