Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3703 | Not Available | Negative | 4378613 - 4379200 | 22968.7 |
| protein of unknown function | SAMN04488524_3704 | Not Available | Negative | 4379230 - 4379952 | 27937.1 |
| putative auto-transporter adhesin, head gin domain | SAMN04488524_3705 | Not Available | Negative | 4379963 - 4380613 | 23055.2 |
| hypothetical protein | SAMN04488524_3706 | Not Available | Negative | 4380650 - 4381822 | 41665.0 |
| helix-turn-helix domain-containing protein | SAMN04488524_3707 | Not Available | Positive | 4382118 - 4382684 | 21445.9 |
| tellurite resistance protein terc | SAMN04488524_3708 | Not Available | Positive | 4382728 - 4383711 | 36070.3 |
| ompa-ompf porin, oop family | SAMN04488524_3709 | Not Available | Negative | 4383780 - 4385108 | 48073.7 |
| metallo-beta-lactamase family protein | SAMN04488524_3710 | Not Available | Negative | 4385328 - 4386713 | 51472.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488524_3711 | Not Available | Negative | 4386723 - 4387553 | 30575.6 |
| hypothetical protein | SAMN04488524_3712 | Not Available | Positive | 4387668 - 4387883 | 7652.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

