Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | SAMN04488524_3633 | Not Available | Positive | 4293822 - 4295972 | 78096.1 |
| ribulose-phosphate 3-epimerase | SAMN04488524_3634 | Not Available | Positive | 4296085 - 4296756 | 23989.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488524_3635 | Not Available | Positive | 4296774 - 4299149 | 89251.4 |
| phosphoserine aminotransferase apoenzyme | SAMN04488524_3636 | Not Available | Positive | 4299197 - 4300261 | 38908.9 |
| d-3-phosphoglycerate dehydrogenase | SAMN04488524_3637 | Not Available | Positive | 4300270 - 4301220 | 33559.6 |
| uncharacterized conserved protein, duf1015 family | SAMN04488524_3638 | Not Available | Positive | 4301284 - 4302525 | 46753.2 |
| hypothetical protein | SAMN04488524_3639 | Not Available | Negative | 4302645 - 4303175 | 20297.8 |
| quinol monooxygenase ygin | SAMN04488524_3640 | Not Available | Negative | 4303182 - 4303466 | 11014.1 |
| hypothetical protein | SAMN04488524_3641 | Not Available | Negative | 4303471 - 4304250 | 29132.4 |
| phosphate starvation-inducible protein phoh | SAMN04488524_3642 | Not Available | Positive | 4304342 - 4305313 | 35661.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

