Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMN04488524_0329 | Not Available | Negative | 459506 - 460747 | 44485.4 |
| hypothetical protein | SAMN04488524_0330 | Not Available | Positive | 460940 - 462484 | 55406.3 |
| transcriptional regulator, gntr family | SAMN04488524_0331 | Not Available | Positive | 462611 - 463348 | 27539.2 |
| alginate lyase | SAMN04488524_0332 | Not Available | Positive | 463404 - 465515 | 78826.9 |
| cupin domain protein | SAMN04488524_0333 | Not Available | Positive | 465522 - 465863 | 12960.5 |
| acetyl esterase/lipase | SAMN04488524_0334 | Not Available | Positive | 465883 - 466767 | 31958.7 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488524_0335 | Not Available | Positive | 466764 - 468050 | 47346.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488524_0336 | Not Available | Positive | 468062 - 468814 | 26204.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0337 | Not Available | Positive | 468876 - 471923 | 109874.0 |
| starch-binding associating with outer membrane | SAMN04488524_0338 | Not Available | Positive | 471934 - 473328 | 52107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

