Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN04488524_3613 | Not Available | Negative | 4275384 - 4275968 | 21271.8 |
| doxx-like family protein | SAMN04488524_3614 | Not Available | Negative | 4276033 - 4276404 | 13669.0 |
| transcriptional regulator, gntr family | SAMN04488524_3615 | Not Available | Negative | 4276496 - 4277923 | 52724.6 |
| eama-like transporter family protein | SAMN04488524_3616 | Not Available | Positive | 4278019 - 4278900 | 30765.9 |
| Trna-ser | Not Available | Not Available | Positive | 4279032 - 4279116 | Not Available |
| alpha-l-fucosidase 2 | SAMN04488524_3618 | Not Available | Positive | 4279242 - 4281698 | 90688.4 |
| hypothetical protein | SAMN04488524_3619 | Not Available | Negative | 4281724 - 4283217 | 58773.1 |
| uncharacterized membrane protein yiaa | SAMN04488524_3620 | Not Available | Positive | 4283350 - 4283817 | 17271.1 |
| aminoglycoside 6-adenylyltransferase | SAMN04488524_3621 | Not Available | Positive | 4283986 - 4284867 | 34474.7 |
| Trna-ser | Not Available | Not Available | Positive | 4284980 - 4285064 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

