Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane-bound dehydrogenase domain-containing protein | SAMN04488524_3593 | Not Available | Positive | 4248334 - 4251438 | 114469.0 |
| mn2+ and fe2+ transporters of the nramp family | SAMN04488524_3594 | Not Available | Positive | 4251568 - 4252773 | 42490.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488524_3595 | Not Available | Positive | 4252793 - 4253809 | 37281.0 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | SAMN04488524_3596 | Not Available | Positive | 4253809 - 4254861 | 38845.6 |
| l-alanine-dl-glutamate epimerase | SAMN04488524_3597 | Not Available | Positive | 4254937 - 4256286 | 50319.4 |
| cytochrome c | SAMN04488524_3598 | Not Available | Positive | 4256370 - 4256729 | 12529.3 |
| protein of unknown function | SAMN04488524_3599 | Not Available | Positive | 4256808 - 4257590 | 28772.1 |
| predicted dehydrogenase | SAMN04488524_3600 | Not Available | Positive | 4257743 - 4258759 | 36642.1 |
| predicted dehydrogenase | SAMN04488524_3601 | Not Available | Positive | 4258770 - 4260125 | 49641.6 |
| glucose/galactose transporter | SAMN04488524_3602 | Not Available | Positive | 4260130 - 4261464 | 48573.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

