Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488524_3583 | Not Available | Negative | 4231779 - 4232276 | 17726.4 |
| arac-type dna-binding protein | SAMN04488524_3584 | Not Available | Negative | 4232529 - 4233356 | 31967.9 |
| phospholipase/carboxylesterase | SAMN04488524_3585 | Not Available | Negative | 4233480 - 4234109 | 22844.6 |
| glyoxalase family protein | SAMN04488524_3586 | Not Available | Negative | 4234111 - 4235046 | 35355.0 |
| surface antigen | SAMN04488524_3587 | Not Available | Positive | 4235148 - 4237682 | 96988.9 |
| fatty acid hydroxylase superfamily protein | SAMN04488524_3588 | Not Available | Positive | 4237774 - 4238388 | 24299.8 |
| dehydrogenase, pqq-dependent, s-gdh family | SAMN04488524_3589 | Not Available | Positive | 4238516 - 4240021 | 54278.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_3590 | Not Available | Positive | 4240041 - 4243193 | 115433.0 |
| starch-binding associating with outer membrane | SAMN04488524_3591 | Not Available | Positive | 4243218 - 4245074 | 67646.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488524_3592 | Not Available | Positive | 4245093 - 4248320 | 117842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

