Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3563 | Not Available | Positive | 4212472 - 4213254 | 29335.7 |
| ferritin-like metal-binding protein ycie | SAMN04488524_3564 | Not Available | Negative | 4213595 - 4214161 | 20642.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488524_3565 | Not Available | Negative | 4214549 - 4215193 | 23032.4 |
| hypothetical protein | SAMN04488524_3566 | Not Available | Positive | 4215541 - 4215810 | 10354.2 |
| hypothetical protein | SAMN04488524_3567 | Not Available | Positive | 4215856 - 4216287 | 16336.5 |
| hypothetical protein | SAMN04488524_3568 | Not Available | Positive | 4216363 - 4217265 | 32318.9 |
| ktsc domain-containing protein | SAMN04488524_3569 | Not Available | Positive | 4217278 - 4217478 | 7922.68 |
| hypothetical protein | SAMN04488524_3570 | Not Available | Positive | 4217591 - 4217767 | 6321.81 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN04488524_3571 | Not Available | Negative | 4217796 - 4218269 | 17823.3 |
| hypothetical protein | SAMN04488524_3572 | Not Available | Positive | 4218326 - 4218547 | 8294.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

