Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yece, duf72 family | SAMN04488524_3553 | Not Available | Positive | 4203192 - 4203956 | 29415.4 |
| pas domain s-box-containing protein | SAMN04488524_3554 | Not Available | Positive | 4204083 - 4205729 | 60844.1 |
| histidine kinase | SAMN04488524_3555 | Not Available | Negative | 4205733 - 4207544 | 68851.3 |
| hypothetical protein | SAMN04488524_3556 | Not Available | Positive | 4207756 - 4208352 | 22724.6 |
| hypothetical protein | SAMN04488524_3557 | Not Available | Negative | 4208369 - 4208779 | 16075.9 |
| hypothetical protein | SAMN04488524_3558 | Not Available | Negative | 4208805 - 4208987 | 6931.05 |
| transcriptional regulator, asnc family | SAMN04488524_3559 | Not Available | Negative | 4209357 - 4209920 | 21585.5 |
| rna polymerase primary sigma factor | SAMN04488524_3560 | Not Available | Positive | 4210047 - 4210901 | 31872.6 |
| hypothetical protein | SAMN04488524_3561 | Not Available | Negative | 4210934 - 4211602 | 25375.3 |
| predicted outer membrane protein | SAMN04488524_3562 | Not Available | Negative | 4211642 - 4212271 | 23720.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

