Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3533 | Not Available | Negative | 4185429 - 4186085 | 24509.6 |
| outer membrane cobalamin receptor protein | SAMN04488524_3534 | Not Available | Negative | 4186115 - 4188067 | 72753.2 |
| two component transcriptional regulator, lyttr family | SAMN04488524_3535 | Not Available | Negative | 4188179 - 4188886 | 26819.0 |
| histidine kinase | SAMN04488524_3536 | Not Available | Negative | 4188883 - 4189908 | 39511.8 |
| 6-phosphogluconolactonase | SAMN04488524_3537 | Not Available | Negative | 4190020 - 4190745 | 26895.3 |
| glucose-6-phosphate 1-dehydrogenase | SAMN04488524_3538 | Not Available | Negative | 4190745 - 4192256 | 57935.1 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | SAMN04488524_3539 | Not Available | Negative | 4192268 - 4193683 | 52377.9 |
| polyphosphate glucokinase | SAMN04488524_3540 | Not Available | Negative | 4193687 - 4194451 | 28164.8 |
| hypothetical protein | SAMN04488524_3541 | Not Available | Negative | 4194556 - 4194756 | 7510.45 |
| hypothetical protein | SAMN04488524_3542 | Not Available | Negative | 4194808 - 4195206 | 15330.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

