Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04488524_0319 | Not Available | Negative | 449855 - 450418 | 20812.1 |
| transcriptional regulator, arac family | SAMN04488524_0320 | Not Available | Positive | 450739 - 451608 | 33534.0 |
| n-terminus of esterase_sgnh_hydro-type | SAMN04488524_0321 | Not Available | Negative | 451610 - 452710 | 41415.1 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN04488524_0322 | Not Available | Negative | 452797 - 453567 | 27495.0 |
| protein of unknown function | SAMN04488524_0323 | Not Available | Negative | 453590 - 454735 | 41793.1 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN04488524_0324 | Not Available | Negative | 454752 - 455594 | 31361.1 |
| transcriptional regulator, laci family | SAMN04488524_0325 | Not Available | Negative | 455594 - 456679 | 39677.7 |
| l-lactate dehydrogenase complex protein llde | SAMN04488524_0326 | Not Available | Positive | 456799 - 457533 | 27125.9 |
| l-lactate dehydrogenase complex protein lldf | SAMN04488524_0327 | Not Available | Positive | 457559 - 458938 | 51984.4 |
| l-lactate dehydrogenase complex protein lldg | SAMN04488524_0328 | Not Available | Positive | 458931 - 459509 | 20681.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

