Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein, porp/sprf family | SAMN04488524_3493 | Not Available | Negative | 4131160 - 4132170 | 37871.8 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN04488524_3494 | Not Available | Negative | 4132145 - 4133092 | 34101.5 |
| hypothetical protein | SAMN04488524_3495 | Not Available | Negative | 4133117 - 4133845 | 25245.5 |
| hypothetical protein | SAMN04488524_3496 | Not Available | Negative | 4133887 - 4135530 | 56085.4 |
| methyltransferase domain-containing protein | SAMN04488524_3497 | Not Available | Positive | 4135893 - 4136624 | 28347.0 |
| ferritin-like metal-binding protein ycie | SAMN04488524_3498 | Not Available | Negative | 4136701 - 4137255 | 20195.7 |
| catalase | SAMN04488524_3499 | Not Available | Positive | 4137579 - 4139768 | 80830.3 |
| hypothetical protein | SAMN04488524_3500 | Not Available | Negative | 4139820 - 4140293 | 16889.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3501 | Not Available | Positive | 4140386 - 4140955 | 21780.0 |
| fecr family protein | SAMN04488524_3502 | Not Available | Positive | 4141089 - 4142249 | 42616.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

