Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3483 | Not Available | Positive | 4121883 - 4122701 | 27432.9 |
| polyphosphate kinase | SAMN04488524_3484 | Not Available | Positive | 4122813 - 4124876 | 79869.1 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488524_3485 | Not Available | Positive | 4124882 - 4125772 | 33293.4 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN04488524_3486 | Not Available | Negative | 4125769 - 4126239 | 17743.1 |
| acyl carrier protein | SAMN04488524_3487 | Not Available | Negative | 4126229 - 4126489 | 9651.67 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | SAMN04488524_3488 | Not Available | Negative | 4126492 - 4127760 | 44879.5 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN04488524_3489 | Not Available | Negative | 4127753 - 4128199 | 16150.6 |
| predicted naringenin-chalcone synthase | SAMN04488524_3490 | Not Available | Negative | 4128207 - 4129259 | 39047.5 |
| methyltransferase domain-containing protein | SAMN04488524_3491 | Not Available | Negative | 4129256 - 4129966 | 26876.5 |
| dehydrogenase (flavoprotein) | SAMN04488524_3492 | Not Available | Negative | 4129970 - 4131100 | 41894.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

