Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | SAMN04488524_3463 | Not Available | Positive | 4100970 - 4102874 | 71143.1 |
| hypothetical protein | SAMN04488524_3464 | Not Available | Positive | 4102906 - 4103517 | 22875.3 |
| two component transcriptional regulator, luxr family | SAMN04488524_3465 | Not Available | Negative | 4103523 - 4104155 | 23365.5 |
| two component regulator propeller | SAMN04488524_3466 | Not Available | Negative | 4104148 - 4107093 | 109952.0 |
| hypothetical protein | SAMN04488524_3467 | Not Available | Positive | 4107342 - 4107704 | 13971.8 |
| arac-type dna-binding protein | SAMN04488524_3468 | Not Available | Positive | 4107731 - 4108588 | 33551.1 |
| hypothetical protein | SAMN04488524_3469 | Not Available | Positive | 4108677 - 4109102 | 15906.4 |
| hypothetical protein | SAMN04488524_3470 | Not Available | Negative | 4109250 - 4109846 | 23310.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3471 | Not Available | Negative | 4109833 - 4110330 | 19514.4 |
| proton glutamate symport protein | SAMN04488524_3472 | Not Available | Positive | 4110463 - 4111890 | 51981.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

