Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN04488524_3453 | Not Available | Positive | 4087823 - 4089013 | 42514.4 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488524_3454 | Not Available | Positive | 4089032 - 4092226 | 115165.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488524_3455 | Not Available | Positive | 4092239 - 4093648 | 51037.7 |
| peroxiredoxin | SAMN04488524_3456 | Not Available | Positive | 4093899 - 4095044 | 40875.0 |
| disulphide bond corrector protein dsbc | SAMN04488524_3457 | Not Available | Positive | 4095208 - 4095654 | 16436.0 |
| cytochrome c biogenesis protein transmembrane region | SAMN04488524_3458 | Not Available | Positive | 4095661 - 4096306 | 22424.3 |
| thiol:disulfide interchange protein dsbd | SAMN04488524_3459 | Not Available | Positive | 4096307 - 4096564 | 9701.43 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN04488524_3460 | Not Available | Positive | 4096793 - 4098046 | 43606.9 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN04488524_3461 | Not Available | Positive | 4098173 - 4099801 | 58929.2 |
| thioredoxin reductase (nadph) | SAMN04488524_3462 | Not Available | Positive | 4099903 - 4100868 | 34682.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

