Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unsaturated rhamnogalacturonyl hydrolase | SAMN04488524_3433 | Not Available | Negative | 4065395 - 4066198 | 30091.3 |
| hypothetical protein | SAMN04488524_3434 | Not Available | Positive | 4066304 - 4066450 | 5803.93 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488524_3435 | Not Available | Positive | 4066531 - 4067970 | 53363.6 |
| acyl-coa reductase | SAMN04488524_3436 | Not Available | Positive | 4067999 - 4069624 | 60179.5 |
| hypothetical protein | SAMN04488524_3437 | Not Available | Negative | 4069681 - 4070142 | 17702.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3438 | Not Available | Positive | 4070319 - 4070873 | 21706.2 |
| fecr family protein | SAMN04488524_3439 | Not Available | Positive | 4070995 - 4072062 | 40622.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_3440 | Not Available | Positive | 4072196 - 4075522 | 120352.0 |
| starch-binding associating with outer membrane | SAMN04488524_3441 | Not Available | Positive | 4075543 - 4077144 | 59118.5 |
| phosphotransferase enzyme family protein | SAMN04488524_3442 | Not Available | Negative | 4077211 - 4078257 | 40442.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

