Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wg containing repeat-containing protein | SAMN04488524_0309 | Not Available | Negative | 437828 - 439579 | 67229.2 |
| hypothetical protein | SAMN04488524_0310 | Not Available | Positive | 439999 - 440463 | 17728.2 |
| hypothetical protein | SAMN04488524_0311 | Not Available | Positive | 440749 - 440970 | 7585.79 |
| adenylosuccinate lyase | SAMN04488524_0312 | Not Available | Positive | 441076 - 442422 | 50708.2 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN04488524_0313 | Not Available | Positive | 442522 - 443073 | 20298.1 |
| hypothetical protein | SAMN04488524_0314 | Not Available | Positive | 443160 - 444362 | 45461.6 |
| hypothetical protein | SAMN04488524_0315 | Not Available | Negative | 444373 - 446091 | 64573.4 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04488524_0316 | Not Available | Negative | 446518 - 447312 | 29593.4 |
| prolipoprotein diacylglyceryl transferase | SAMN04488524_0317 | Not Available | Negative | 447325 - 448479 | 43075.2 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN04488524_0318 | Not Available | Negative | 448511 - 449830 | 49208.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

