Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| activator of hsp90 atpase homolog 1-like protein | SAMN04488524_3403 | Not Available | Negative | 4026270 - 4026650 | 14559.9 |
| glutaryl-coa dehydrogenase | SAMN04488524_3404 | Not Available | Negative | 4026651 - 4027841 | 43766.9 |
| dihydroneopterin aldolase | SAMN04488524_3405 | Not Available | Positive | 4027945 - 4028319 | 14199.3 |
| acyl-coa thioester hydrolase | SAMN04488524_3406 | Not Available | Negative | 4028316 - 4028804 | 19098.0 |
| hsp20 family protein | SAMN04488524_3407 | Not Available | Positive | 4028892 - 4029326 | 16419.3 |
| redoxin | SAMN04488524_3408 | Not Available | Positive | 4029491 - 4030834 | 50225.5 |
| serine/threonine protein kinase | SAMN04488524_3409 | Not Available | Negative | 4030860 - 4032404 | 56869.6 |
| hypothetical protein | SAMN04488524_3410 | Not Available | Negative | 4032411 - 4033208 | 29961.6 |
| cell division protein ftsw, lipid ii flippase | SAMN04488524_3411 | Not Available | Negative | 4033216 - 4037205 | 147820.0 |
| serine/threonine protein phosphatase prpc | SAMN04488524_3412 | Not Available | Negative | 4037207 - 4038586 | 50158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

