Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | SAMN04488524_3393 | Not Available | Positive | 4014601 - 4017045 | 90649.6 |
| osmotically inducible protein osmc | SAMN04488524_3394 | Not Available | Positive | 4017098 - 4017508 | 14245.8 |
| glutamate 5-kinase | SAMN04488524_3395 | Not Available | Positive | 4017618 - 4018652 | 37369.5 |
| glutamate-5-semialdehyde dehydrogenase | SAMN04488524_3396 | Not Available | Positive | 4018661 - 4019908 | 45530.9 |
| pas domain s-box-containing protein | SAMN04488524_3397 | Not Available | Positive | 4020112 - 4021164 | 40809.4 |
| response regulator receiver domain-containing protein | SAMN04488524_3398 | Not Available | Positive | 4021185 - 4021625 | 16771.2 |
| phosphoglucomutase | SAMN04488524_3399 | Not Available | Negative | 4021637 - 4023370 | 63456.5 |
| aspartate kinase | SAMN04488524_3400 | Not Available | Positive | 4023580 - 4024893 | 48585.5 |
| hypothetical protein | SAMN04488524_3401 | Not Available | Negative | 4024903 - 4025079 | 7170.39 |
| diaminopimelate decarboxylase | SAMN04488524_3402 | Not Available | Positive | 4025081 - 4026232 | 42841.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

