Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease-3 | SAMN04488524_3363 | Not Available | Positive | 3982482 - 3983312 | 31866.5 |
| putative binding domain-containing protein, n-terminal | SAMN04488524_3364 | Not Available | Positive | 3983322 - 3985358 | 73551.3 |
| cold-shock dna-binding protein family | SAMN04488524_3365 | Not Available | Negative | 3985613 - 3985804 | 6996.4 |
| nad(p)h-dependent fmn reductase | SAMN04488524_3366 | Not Available | Positive | 3985919 - 3986476 | 20806.1 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488524_3367 | Not Available | Positive | 3986548 - 3987057 | 18993.4 |
| hypothetical protein | SAMN04488524_3368 | Not Available | Positive | 3987181 - 3987912 | 27152.3 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04488524_3369 | Not Available | Positive | 3988083 - 3990407 | 86674.1 |
| protein of unknown function | SAMN04488524_3370 | Not Available | Positive | 3990413 - 3991225 | 29446.6 |
| hypothetical protein | SAMN04488524_3371 | Not Available | Positive | 3991315 - 3991554 | 9148.08 |
| thioredoxin reductase | SAMN04488524_3372 | Not Available | Positive | 3991656 - 3992552 | 32154.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

