Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3353 | Not Available | Positive | 3970943 - 3972100 | 42957.2 |
| hypothetical protein | SAMN04488524_3354 | Not Available | Positive | 3972106 - 3973095 | 38042.7 |
| hypothetical protein | SAMN04488524_3355 | Not Available | Positive | 3973178 - 3973501 | 12183.6 |
| hypothetical protein | SAMN04488524_3356 | Not Available | Negative | 3973507 - 3973725 | 8182.76 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04488524_3357 | Not Available | Negative | 3973751 - 3975166 | 53473.3 |
| hypothetical protein | SAMN04488524_3358 | Not Available | Negative | 3975193 - 3975573 | 13761.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3359 | Not Available | Positive | 3975841 - 3976422 | 22596.3 |
| fecr family protein | SAMN04488524_3360 | Not Available | Positive | 3976520 - 3977491 | 36707.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_3361 | Not Available | Positive | 3977540 - 3980938 | 125920.0 |
| starch-binding associating with outer membrane | SAMN04488524_3362 | Not Available | Positive | 3980964 - 3982466 | 56041.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

