Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04488524_3343 | Not Available | Positive | 3959420 - 3960367 | 34951.3 |
| abc-2 type transport system permease protein | SAMN04488524_3344 | Not Available | Positive | 3960373 - 3961338 | 35829.9 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488524_3345 | Not Available | Positive | 3961426 - 3962517 | 40657.6 |
| protein of unknown function | SAMN04488524_3346 | Not Available | Positive | 3962680 - 3964140 | 56771.8 |
| protein of unknown function | SAMN04488524_3347 | Not Available | Positive | 3964137 - 3964709 | 22154.8 |
| uncharacterized protein ypo0396 | SAMN04488524_3348 | Not Available | Positive | 3964702 - 3968103 | 131615.0 |
| lactoylglutathione lyase | SAMN04488524_3349 | Not Available | Negative | 3968155 - 3968541 | 14753.4 |
| hypothetical protein | SAMN04488524_3350 | Not Available | Positive | 3968644 - 3969162 | 19568.8 |
| hypothetical protein | SAMN04488524_3351 | Not Available | Positive | 3969204 - 3969866 | 24406.0 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN04488524_3352 | Not Available | Positive | 3969898 - 3970938 | 37446.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

