Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caax protease self-immunity | SAMN04488524_3279 | Not Available | Negative | 3889554 - 3890360 | 30864.7 |
| hypothetical protein | SAMN04488524_3280 | Not Available | Negative | 3890463 - 3890660 | 7266.87 |
| hypothetical protein | SAMN04488524_3282 | Not Available | Positive | 3891497 - 3891817 | 11691.6 |
| putative amidase domain-containing protein | SAMN04488524_3283 | Not Available | Positive | 3892336 - 3893400 | 39379.9 |
| hypothetical protein | SAMN04488524_3284 | Not Available | Positive | 3893413 - 3898314 | 183986.0 |
| hypothetical protein | SAMN04488524_3285 | Not Available | Positive | 3898325 - 3902920 | 174864.0 |
| hypothetical protein | SAMN04488524_3286 | Not Available | Positive | 3902933 - 3903226 | 10991.3 |
| dna alkylation repair enzyme | SAMN04488524_3287 | Not Available | Positive | 3903270 - 3903869 | 23011.8 |
| hypothetical protein | SAMN04488524_3288 | Not Available | Negative | 3903896 - 3904138 | 9171.13 |
| tonb family c-terminal domain-containing protein | SAMN04488524_3289 | Not Available | Positive | 3904396 - 3905097 | 26465.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

