Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like metal-binding protein ycie | SAMN04488524_3267 | Not Available | Negative | 3881986 - 3882492 | 18940.9 |
| hypothetical protein | SAMN04488524_3268 | Not Available | Negative | 3882561 - 3882884 | 11960.4 |
| small conductance mechanosensitive channel | SAMN04488524_3269 | Not Available | Positive | 3883104 - 3883913 | 30126.8 |
| membrane protein | SAMN04488524_3270 | Not Available | Positive | 3883921 - 3884874 | 34793.1 |
| glycine/d-amino acid oxidase | SAMN04488524_3271 | Not Available | Positive | 3885110 - 3886675 | 56993.4 |
| putative membrane protein | SAMN04488524_3272 | Not Available | Positive | 3886737 - 3887345 | 21841.2 |
| inorganic pyrophosphatase | SAMN04488524_3273 | Not Available | Positive | 3887495 - 3888295 | 30025.5 |
| hypothetical protein | SAMN04488524_3275 | Not Available | Positive | 3888555 - 3888827 | 9856.73 |
| hypothetical protein | SAMN04488524_3276 | Not Available | Positive | 3888830 - 3889087 | 9567.34 |
| hypothetical protein | SAMN04488524_3277 | Not Available | Positive | 3889101 - 3889247 | 5360.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

