Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3257 | Not Available | Positive | 3874508 - 3874885 | 14375.2 |
| chap domain-containing protein | SAMN04488524_3258 | Not Available | Positive | 3874825 - 3875343 | 19295.3 |
| hypothetical protein | SAMN04488524_3259 | Not Available | Positive | 3875362 - 3875997 | 23091.1 |
| hypothetical protein | SAMN04488524_3260 | Not Available | Positive | 3876001 - 3876636 | 23401.1 |
| hypothetical protein | SAMN04488524_3261 | Not Available | Negative | 3877080 - 3877400 | 12658.2 |
| hypothetical protein | SAMN04488524_3262 | Not Available | Positive | 3877612 - 3878304 | 27031.1 |
| transcriptional regulator, arac family | SAMN04488524_3263 | Not Available | Positive | 3878487 - 3879251 | 28699.8 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04488524_3264 | Not Available | Positive | 3879315 - 3879710 | 14249.0 |
| hypothetical protein | SAMN04488524_3265 | Not Available | Negative | 3879795 - 3880031 | 9336.98 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN04488524_3266 | Not Available | Negative | 3880373 - 3881254 | 34347.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

