Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl oligopeptidase family protein | SAMN04488524_3246 | Not Available | Positive | 3857695 - 3860313 | 100216.0 |
| hypothetical protein | SAMN04488524_3247 | Not Available | Negative | 3860389 - 3860583 | 7457.07 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3248 | Not Available | Positive | 3860758 - 3861348 | 22814.0 |
| fecr family protein | SAMN04488524_3249 | Not Available | Positive | 3861440 - 3862606 | 43407.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_3250 | Not Available | Positive | 3862868 - 3866164 | 121005.0 |
| susd family protein | SAMN04488524_3251 | Not Available | Positive | 3866176 - 3867567 | 51393.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488524_3252 | Not Available | Positive | 3867554 - 3870163 | 99950.7 |
| fic family protein | SAMN04488524_3253 | Not Available | Negative | 3870503 - 3871867 | 52031.1 |
| hypothetical protein | SAMN04488524_3255 | Not Available | Positive | 3873346 - 3873729 | 14622.1 |
| hypothetical protein | SAMN04488524_3256 | Not Available | Positive | 3873809 - 3874453 | 22862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

