Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04488524_3226 | Not Available | Positive | 3833567 - 3834262 | 26043.9 |
| hypothetical protein | SAMN04488524_3227 | Not Available | Positive | 3834280 - 3834567 | 11003.5 |
| hypothetical protein | SAMN04488524_3228 | Not Available | Positive | 3834551 - 3835042 | 18386.2 |
| hypothetical protein | SAMN04488524_3229 | Not Available | Positive | 3835267 - 3835533 | 9486.1 |
| hypothetical protein | SAMN04488524_3230 | Not Available | Positive | 3835611 - 3836435 | 31587.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488524_3231 | Not Available | Positive | 3836583 - 3837188 | 23644.1 |
| hypothetical protein | SAMN04488524_3232 | Not Available | Negative | 3837300 - 3837458 | 6055.66 |
| hypothetical protein | SAMN04488524_3233 | Not Available | Negative | 3837468 - 3837602 | 5185.08 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04488524_3234 | Not Available | Negative | 3837599 - 3838609 | 39242.1 |
| hypothetical protein | SAMN04488524_3235 | Not Available | Positive | 3839199 - 3839390 | 7093.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

