Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | SAMN04488524_0288 | Not Available | Positive | 417056 - 417697 | 24750.5 |
| 3-oxoacid coa-transferase subunit b | SAMN04488524_0289 | Not Available | Negative | 417729 - 418388 | 23312.7 |
| 3-oxoacid coa-transferase subunit a | SAMN04488524_0290 | Not Available | Negative | 418406 - 419107 | 25379.6 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488524_0291 | Not Available | Negative | 419159 - 420259 | 39885.4 |
| dna mismatch repair protein muts2 | SAMN04488524_0292 | Not Available | Negative | 420325 - 422703 | 89858.0 |
| protein of unknown function | SAMN04488524_0293 | Not Available | Negative | 422706 - 423248 | 20345.9 |
| hypothetical protein | SAMN04488524_0294 | Not Available | Positive | 423319 - 424008 | 25892.4 |
| l-amino acid n-acyltransferase ynca | SAMN04488524_0295 | Not Available | Positive | 424005 - 424502 | 19243.7 |
| protein of unknown function | SAMN04488524_0296 | Not Available | Positive | 424514 - 425320 | 30658.2 |
| aspartate kinase | SAMN04488524_0297 | Not Available | Positive | 425324 - 426586 | 47783.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

