Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pld-like domain-containing protein | SAMN04488524_3196 | Not Available | Negative | 3799217 - 3799987 | 29793.7 |
| hypothetical protein | SAMN04488524_3197 | Not Available | Positive | 3800111 - 3802339 | 86900.5 |
| hypothetical protein | SAMN04488524_3198 | Not Available | Positive | 3802480 - 3803103 | 24259.3 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04488524_3199 | Not Available | Positive | 3803183 - 3803710 | 18523.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3200 | Not Available | Positive | 3804506 - 3805102 | 23005.9 |
| hypothetical protein | SAMN04488524_3201 | Not Available | Positive | 3805210 - 3805983 | 29279.5 |
| hypothetical protein | SAMN04488524_3202 | Not Available | Negative | 3806155 - 3806925 | 29195.5 |
| hypothetical protein | SAMN04488524_3203 | Not Available | Negative | 3807226 - 3807387 | 6147.39 |
| hypothetical protein | SAMN04488524_3204 | Not Available | Negative | 3807419 - 3807862 | 16587.5 |
| uncharacterized protein containing a zn-ribbon | SAMN04488524_3205 | Not Available | Positive | 3808033 - 3808413 | 14762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

