Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3176 | Not Available | Negative | 3777095 - 3777709 | 23992.0 |
| hypothetical protein | SAMN04488524_3177 | Not Available | Positive | 3777837 - 3777956 | 4419.35 |
| phospholipase_d-nuclease n-terminal | SAMN04488524_3178 | Not Available | Positive | 3777992 - 3778168 | 6751.7 |
| hypothetical protein | SAMN04488524_3179 | Not Available | Positive | 3778340 - 3779350 | 39130.3 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04488524_3180 | Not Available | Positive | 3779362 - 3779694 | 12935.4 |
| hypothetical protein | SAMN04488524_3181 | Not Available | Positive | 3779795 - 3781702 | 71745.6 |
| predicted p-loop atpase, kap-like | SAMN04488524_3182 | Not Available | Positive | 3782060 - 3783931 | 70511.9 |
| hypothetical protein | SAMN04488524_3183 | Not Available | Positive | 3783933 - 3784766 | 30436.5 |
| hypothetical protein | SAMN04488524_3184 | Not Available | Positive | 3784756 - 3786075 | 48622.2 |
| tatd dnase family protein | SAMN04488524_3185 | Not Available | Positive | 3786068 - 3786799 | 28049.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

