Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nucleotidyltransferase | SAMN04488524_3153 | Not Available | Positive | 3754330 - 3755394 | 41251.4 |
| hypothetical protein | SAMN04488524_3154 | Not Available | Positive | 3755570 - 3755965 | 14016.3 |
| hypothetical protein | SAMN04488524_3155 | Not Available | Negative | 3756091 - 3756324 | 8302.74 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488524_3156 | Not Available | Negative | 3756444 - 3757202 | 27979.8 |
| nadh dehydrogenase | SAMN04488524_3157 | Not Available | Positive | 3757446 - 3758717 | 46913.3 |
| mtn3 and saliva related transmembrane protein | SAMN04488524_3158 | Not Available | Negative | 3758756 - 3759028 | 10118.7 |
| spoiiaa-like | SAMN04488524_3159 | Not Available | Negative | 3759082 - 3759348 | 10101.1 |
| cold-shock dna-binding protein family | SAMN04488524_3160 | Not Available | Negative | 3759382 - 3759573 | 6911.23 |
| hypothetical protein | SAMN04488524_3161 | Not Available | Positive | 3759833 - 3760795 | 34511.4 |
| signal transduction histidine kinase | SAMN04488524_3163 | Not Available | Positive | 3761276 - 3762361 | 41119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

