Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mtn3 and saliva related transmembrane protein | SAMN04488524_3122 | Not Available | Negative | 3731957 - 3732229 | 10086.7 |
| ferritin-like metal-binding protein ycie | SAMN04488524_3123 | Not Available | Negative | 3732325 - 3732879 | 20194.8 |
| alcohol dehydrogenase | SAMN04488524_3125 | Not Available | Positive | 3733565 - 3734722 | 42086.7 |
| hypothetical protein | SAMN04488524_3126 | Not Available | Negative | 3734777 - 3734962 | 7194.33 |
| hypothetical protein | SAMN04488524_3127 | Not Available | Positive | 3734999 - 3735145 | 5891.28 |
| dna ligase d | SAMN04488524_3128 | Not Available | Negative | 3735403 - 3738192 | 105461.0 |
| hypothetical protein | SAMN04488524_3129 | Not Available | Negative | 3738197 - 3738490 | 11015.8 |
| hypothetical protein | SAMN04488524_3130 | Not Available | Negative | 3738565 - 3739026 | 17041.4 |
| hypothetical protein | SAMN04488524_3131 | Not Available | Negative | 3739023 - 3739166 | 5036.29 |
| hypothetical protein | SAMN04488524_3132 | Not Available | Positive | 3739413 - 3739571 | 5897.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

