Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3110 | Not Available | Negative | 3715743 - 3717950 | 83136.2 |
| hypothetical protein | SAMN04488524_3111 | Not Available | Positive | 3718386 - 3718976 | 22857.3 |
| dinb superfamily protein | SAMN04488524_3113 | Not Available | Positive | 3719282 - 3719821 | 20903.9 |
| fr47-like protein | SAMN04488524_3114 | Not Available | Positive | 3719860 - 3720567 | 25781.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_3115 | Not Available | Positive | 3721038 - 3724688 | 135792.0 |
| susd family protein | SAMN04488524_3116 | Not Available | Positive | 3724690 - 3726183 | 57156.9 |
| hypothetical protein | SAMN04488524_3117 | Not Available | Positive | 3726201 - 3727676 | 54795.0 |
| thioredoxin | SAMN04488524_3118 | Not Available | Positive | 3727739 - 3729142 | 53929.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_3119 | Not Available | Positive | 3729261 - 3729854 | 22968.5 |
| fecr family protein | SAMN04488524_3120 | Not Available | Positive | 3729967 - 3731133 | 43175.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

