Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_3100 | Not Available | Positive | 3707844 - 3708167 | 12924.4 |
| abc-type multidrug transport system, atpase component | SAMN04488524_3101 | Not Available | Positive | 3708149 - 3708805 | 25059.8 |
| tigr00341 family protein | SAMN04488524_3102 | Not Available | Positive | 3708884 - 3710233 | 50030.8 |
| alanine or glycine:cation symporter, agcs family | SAMN04488524_3103 | Not Available | Negative | 3710321 - 3711736 | 50703.7 |
| hypothetical protein | SAMN04488524_3104 | Not Available | Negative | 3711998 - 3712168 | 6484.02 |
| ribonuclease bn, trna processing enzyme | SAMN04488524_3105 | Not Available | Positive | 3712383 - 3713174 | 29711.6 |
| hypothetical protein | SAMN04488524_3106 | Not Available | Positive | 3713228 - 3713641 | 16113.9 |
| mj0570-related uncharacterized domain-containing protein | SAMN04488524_3107 | Not Available | Positive | 3713832 - 3714530 | 26224.4 |
| rieske | SAMN04488524_3108 | Not Available | Positive | 3714758 - 3715051 | 10841.8 |
| low affinity fe/cu permease | SAMN04488524_3109 | Not Available | Positive | 3715026 - 3715577 | 20422.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

