Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488524_3080 | Not Available | Positive | 3681938 - 3682330 | 14649.0 |
| fic family protein | SAMN04488524_3081 | Not Available | Negative | 3682316 - 3683416 | 41800.6 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488524_3082 | Not Available | Positive | 3683568 - 3684794 | 45551.4 |
| hypothetical protein | SAMN04488524_3083 | Not Available | Negative | 3684927 - 3685139 | 7696.78 |
| hypothetical protein | SAMN04488524_3084 | Not Available | Positive | 3685301 - 3685465 | 5952.37 |
| dihydrofolate reductase | SAMN04488524_3085 | Not Available | Positive | 3685506 - 3686585 | 40527.0 |
| phnb protein | SAMN04488524_3086 | Not Available | Negative | 3686599 - 3687006 | 15539.7 |
| secondary thiamine-phosphate synthase enzyme | SAMN04488524_3087 | Not Available | Positive | 3687178 - 3687615 | 16326.5 |
| hypothetical protein | SAMN04488524_3088 | Not Available | Positive | 3687704 - 3687883 | 6708.0 |
| hypothetical protein | SAMN04488524_3089 | Not Available | Negative | 3688185 - 3688949 | 28832.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

