Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase components of abc transporters with duplicated atpase domains | SAMN04488524_3050 | Not Available | Negative | 3642873 - 3644462 | 59829.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488524_3051 | Not Available | Negative | 3644605 - 3645225 | 23249.9 |
| sulfate permease, sulp family | SAMN04488524_3052 | Not Available | Positive | 3645347 - 3646882 | 54883.9 |
| prephenate dehydrogenase | SAMN04488524_3053 | Not Available | Negative | 3646883 - 3647731 | 30884.1 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04488524_3054 | Not Available | Negative | 3647750 - 3648895 | 42668.5 |
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN04488524_3055 | Not Available | Negative | 3649008 - 3652871 | 142986.0 |
| predicted arabinose efflux permease, mfs family | SAMN04488524_3056 | Not Available | Positive | 3653024 - 3654226 | 44615.1 |
| protein of unknown function (du1801) | SAMN04488524_3057 | Not Available | Positive | 3654271 - 3654663 | 14966.8 |
| hypothetical protein | SAMN04488524_3058 | Not Available | Negative | 3654678 - 3655529 | 30111.2 |
| tfox n-terminal domain-containing protein | SAMN04488524_3059 | Not Available | Negative | 3655597 - 3655953 | 13475.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

