Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | SAMN04488524_3040 | Not Available | Positive | 3633918 - 3635345 | 51851.7 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN04488524_3041 | Not Available | Positive | 3635382 - 3637262 | 68851.4 |
| multidrug resistance protein | SAMN04488524_3042 | Not Available | Negative | 3637244 - 3638461 | 44982.3 |
| sugar phosphate isomerase/epimerase | SAMN04488524_3043 | Not Available | Negative | 3638601 - 3639548 | 35429.9 |
| protein of unknown function | SAMN04488524_3044 | Not Available | Positive | 3639600 - 3640091 | 18903.7 |
| iron-binding zinc finger cdgsh type | SAMN04488524_3045 | Not Available | Positive | 3640148 - 3640423 | 10107.3 |
| protein of unknown function | SAMN04488524_3046 | Not Available | Positive | 3640482 - 3641189 | 24833.9 |
| hypothetical protein | SAMN04488524_3047 | Not Available | Positive | 3641257 - 3641790 | 20330.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488524_3048 | Not Available | Positive | 3641790 - 3642356 | 21585.0 |
| uncharacterized membrane protein | SAMN04488524_3049 | Not Available | Positive | 3642411 - 3642881 | 17518.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

