Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c, mono-and diheme variants | SAMN04488524_3020 | Not Available | Positive | 3612880 - 3615159 | 84440.4 |
| polysaccharide lyase | SAMN04488524_3021 | Not Available | Positive | 3615874 - 3616662 | 28544.1 |
| phoh-like atpase | SAMN04488524_3022 | Not Available | Positive | 3616831 - 3618180 | 50762.1 |
| aminopeptidase n | SAMN04488524_3023 | Not Available | Positive | 3618230 - 3620092 | 69452.1 |
| inner membrane transporter rhta | SAMN04488524_3024 | Not Available | Negative | 3620096 - 3620944 | 29355.5 |
| hypothetical protein | SAMN04488524_3025 | Not Available | Positive | 3621416 - 3621985 | 21570.8 |
| hypothetical protein | SAMN04488524_3026 | Not Available | Positive | 3621991 - 3622785 | 28665.8 |
| dihydroflavonol-4-reductase | SAMN04488524_3027 | Not Available | Positive | 3622793 - 3623779 | 36233.4 |
| histidine kinase | SAMN04488524_3028 | Not Available | Positive | 3623826 - 3624923 | 42754.7 |
| two component transcriptional regulator, lyttr family | SAMN04488524_3029 | Not Available | Positive | 3624898 - 3625662 | 29732.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

