Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488524_0268 | Not Available | Negative | 393964 - 395115 | 42522.0 |
| acetyl esterase/lipase | SAMN04488524_0269 | Not Available | Negative | 395210 - 396091 | 32468.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0270 | Not Available | Negative | 396142 - 396687 | 20870.3 |
| Trna-ser | Not Available | Not Available | Positive | 396809 - 396895 | Not Available |
| hypothetical protein | SAMN04488524_0272 | Not Available | Negative | 396965 - 399046 | 79616.4 |
| acetyl-coa c-acetyltransferase | SAMN04488524_0273 | Not Available | Positive | 399304 - 400479 | 40457.5 |
| hypothetical protein | SAMN04488524_0274 | Not Available | Positive | 400482 - 401405 | 34590.6 |
| proton-dependent oligopeptide transporter, pot family | SAMN04488524_0275 | Not Available | Positive | 401601 - 403355 | 64726.3 |
| proton-dependent oligopeptide transporter, pot family | SAMN04488524_0276 | Not Available | Positive | 403363 - 404916 | 57669.6 |
| dolichol-phosphate mannosyltransferase | SAMN04488524_0277 | Not Available | Positive | 405012 - 405746 | 28308.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

