Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 46 - 157 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 183 - 294 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 217 - 3095 | 18.01 |
| hypothetical protein | SAMN04488524_0001 | Not Available | Negative | 1 - 2780 | 97885.0 |
| hypothetical protein | SAMN04488524_0002 | Not Available | Negative | 3285 - 3809 | 20213.7 |
| glycosyl hydrolase family 26 | SAMN04488524_0003 | Not Available | Negative | 3996 - 7088 | 117938.0 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488524_0004 | Not Available | Negative | 7085 - 8473 | 52981.6 |
| carboxypepd_reg-like domain-containing protein | SAMN04488524_0005 | Not Available | Positive | 8938 - 9744 | 31096.9 |
| hypothetical protein | SAMN04488524_0006 | Not Available | Positive | 9815 - 10114 | 11430.7 |
| hypothetical protein | SAMN04488524_0007 | Not Available | Positive | 10163 - 10465 | 11660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

