Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488524_2960 | Not Available | Positive | 3542850 - 3543890 | 37951.4 |
| acyl-coa hydrolase | SAMN04488524_2961 | Not Available | Positive | 3544040 - 3544429 | 14673.7 |
| hypothetical protein | SAMN04488524_2962 | Not Available | Positive | 3544501 - 3544872 | 14111.4 |
| iron complex outermembrane recepter protein | SAMN04488524_2963 | Not Available | Positive | 3545176 - 3547440 | 83329.3 |
| hypothetical protein | SAMN04488524_2964 | Not Available | Positive | 3547452 - 3548735 | 46001.6 |
| hypothetical protein | SAMN04488524_2965 | Not Available | Positive | 3548747 - 3549181 | 16348.0 |
| protein sco1/2 | SAMN04488524_2966 | Not Available | Positive | 3549181 - 3549822 | 24456.6 |
| hypothetical protein | SAMN04488524_2967 | Not Available | Negative | 3549865 - 3551637 | 66793.3 |
| pas domain s-box-containing protein | SAMN04488524_2968 | Not Available | Positive | 3551771 - 3552955 | 44909.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488524_2969 | Not Available | Positive | 3552956 - 3554014 | 39777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

