Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2950 | Not Available | Positive | 3528337 - 3529278 | 35470.3 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488524_2951 | Not Available | Positive | 3529299 - 3530645 | 50110.1 |
| general stress protein 26 | SAMN04488524_2952 | Not Available | Positive | 3530732 - 3531268 | 19899.5 |
| k+-transporting atpase atpase a chain | SAMN04488524_2953 | Not Available | Positive | 3531616 - 3533337 | 62494.3 |
| k+-transporting atpase atpase b chain | SAMN04488524_2954 | Not Available | Positive | 3533347 - 3535377 | 72122.3 |
| k+-transporting atpase atpase c chain | SAMN04488524_2955 | Not Available | Positive | 3535390 - 3535956 | 19890.4 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN04488524_2956 | Not Available | Positive | 3535965 - 3537035 | 39030.0 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN04488524_2957 | Not Available | Positive | 3537160 - 3538290 | 42897.5 |
| pas/pac sensor signal transduction histidine kinase | SAMN04488524_2958 | Not Available | Positive | 3538326 - 3540080 | 65812.5 |
| methionine synthase (b12-independent) | SAMN04488524_2959 | Not Available | Positive | 3540514 - 3542832 | 87825.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

