Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN04488524_2919 | Not Available | Positive | 3486261 - 3488228 | 74522.1 |
| dipeptidyl-peptidase-4 | SAMN04488524_2920 | Not Available | Negative | 3488264 - 3490438 | 82054.7 |
| phosphoglycerol transferase mdob | SAMN04488524_2921 | Not Available | Negative | 3490443 - 3492308 | 70620.7 |
| hypothetical protein | SAMN04488524_2922 | Not Available | Negative | 3492321 - 3492998 | 24569.8 |
| methylglutaconyl-coa hydratase | SAMN04488524_2923 | Not Available | Negative | 3493017 - 3493796 | 28099.9 |
| competence protein comec | SAMN04488524_2924 | Not Available | Negative | 3493804 - 3495615 | 68859.6 |
| dna-binding transcriptional regulator, merr family | SAMN04488524_2925 | Not Available | Negative | 3495836 - 3496171 | 13100.9 |
| alanyl-trna synthetase | SAMN04488524_2926 | Not Available | Positive | 3496308 - 3499010 | 101681.0 |
| hypothetical protein | SAMN04488524_2927 | Not Available | Negative | 3499028 - 3499162 | 5137.56 |
| protein of unknown function | SAMN04488524_2928 | Not Available | Negative | 3499214 - 3499912 | 26132.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

