Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2879 | Not Available | Positive | 3439157 - 3440698 | 56144.9 |
| hypothetical protein | SAMN04488524_2880 | Not Available | Positive | 3440778 - 3441158 | 13974.1 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN04488524_2881 | Not Available | Positive | 3441397 - 3444779 | 116730.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488524_2882 | Not Available | Positive | 3444790 - 3445785 | 36743.9 |
| outer membrane transport energization protein tonb | SAMN04488524_2883 | Not Available | Positive | 3445871 - 3446695 | 30078.1 |
| modulator of drug activity b | SAMN04488524_2884 | Not Available | Negative | 3446754 - 3447371 | 23604.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04488524_2885 | Not Available | Positive | 3447468 - 3448391 | 35512.9 |
| spore maturation protein spma | SAMN04488524_2886 | Not Available | Negative | 3448377 - 3449648 | 45237.7 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488524_2887 | Not Available | Negative | 3449676 - 3452528 | 107639.0 |
| yidc/oxa1 family membrane protein insertase | SAMN04488524_2888 | Not Available | Negative | 3452711 - 3454513 | 67827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

